Package 'rsyncrosim'

Description

Adds package(s) to a SsimLibrary.

Usage

addPackage(ssimLibrary, packages, versions = NULL, forceUpdate = FALSE)

## S4 method for signature 'character'
addPackage(ssimLibrary, packages, versions = NULL, forceUpdate = FALSE)

## S4 method for signature 'SsimLibrary'
addPackage(ssimLibrary, packages, versions = NULL, forceUpdate = FALSE)

Arguments

Value

Invisibly returns TRUE upon success (i.e.successful addition of the package) or FALSE upon failure.

See Also

packages

Examples

## Not run: 
# Install "stsim" and "stsimecodep" SyncroSim packages
installPackage(packages = c("stsim", "stsim"),
               versions = c("4.0.0", "4.0.1"))
installPackage("stsimecodep")

# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Add package
addPackage(myLibrary, packages = "stsim", versions = "4.0.1")
addPackage(myLibrary, packages = "stsimecodep")
packages(myLibrary)

# Change package version
addPackage(myLibrary, packages = "stsim", versions = "4.0.0")
addPackage(myLibrary, packages = "stsim", versions = "4.0.1")

# Remove package
removePackage(myLibrary, packages = c("stsim", "stsimecodep"))
packages(myLibrary)

## End(Not run)

Description

This function is mostly used internally to add rows to data.frames associated with SyncroSim Datasheets retrieved from the command line.

Usage

addRow(targetDataframe, value)

## S4 method for signature 'data.frame'
addRow(targetDataframe, value)

Arguments

Details

Preserves the types and factor levels of the targetDataframe. Fills missing values if possible using factor levels. If value is a named vector or list, it will be converted to a single row data.frame. If value is an unnamed vector or list, the number of elements should equal the number of columns in the targetDataframe; elements are assumed to be in same order as data.frame columns.

Value

A dataframe with new rows.

Examples

# Create an example data.frame
oldDataframe <- as.data.frame(mtcars)

# Add a single row to the example data.frame
newDataframe <- addRow(oldDataframe, list(mpg = 100, wt = 10))

# Create an example data.frame with more than one row of data
multipleRows <- data.frame(mpg = c(40, 50, 75), wt = c(4, 7, 6))

# Add the old example data.frame to the new example data.frame
newDataframe <- addRow(oldDataframe, multipleRows)

Description

Backup a SsimLibrary. The backup folder can be defined in the SyncroSim User Interface, but is by default at the same level as the SsimLibrary file, and is called libraryName.backup.

Usage

backup(ssimObject)

## S4 method for signature 'character'
backup(ssimObject)

## S4 method for signature 'SsimObject'
backup(ssimObject)

Arguments

Value

Invisibly returns TRUE upon success (i.e.successful backup) and FALSE upon failure.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Back up data from the SsimLibrary
backup(myLibrary)

## End(Not run)

Description

Create or open a Chart from a SyncroSim Project.

Usage

chart(ssimObject = NULL, chart = NULL, create = FALSE, summary = FALSE)

Arguments

Value

A Chart object representing a SyncroSim chart

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, 
                         session = mySession,
                         packages = "stsim") 
myProject <- project(myLibrary, project = "My Project")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Create a new chart
myChart <- chart(myProject, chart = "New Chart")

## End(Not run)

Description

Chart object representing a SyncroSim Chart object. A Chart object is used to create line or column charts from tabular output data in the and can be viewed using the SyncroSim User Interface.

Slots

session

Session object. The Session associated with the Chart's SsimLibrary

filepath

character string. The path to the Chart's SsimLibrary on disk

chartId

integer. The Chart id

projectId

integer. The Project id

See Also

See chart for options when creating or loading a SyncroSim Chart

Description

Retrieves the available variables for charting, or the variables that are set for an existing chart.

Usage

chartCriteria(ssimObject, chart = NULL, variable = NULL, filter = NULL)

## S4 method for signature 'SsimObject'
chartCriteria(ssimObject, chart = NULL, variable = NULL, filter = NULL)

Arguments

Details

Example arguments:

• If ssimObject is SyncroSim Project and chart is NULL: Returns a data.frame of available variables for creating a new chart.

• If ssimObject is SyncroSIm Chart or chart is not NULL: Returns a data.frame of variables in use by the specified chart.

• If variable is not NULL: Returns a list of filter columns that belong to the given variable.

• If variable and filter are not NULL: Returns a dataframe of value IDs and names that belong to the given variable and filter.

Value

A data.frame or list of variables, filter columns, and filter values.

Examples

## Not run: 
# Create a chart object
myChart <- chart(myProject, chart = "New Chart")

# Retrieve variables that can be used to create new charts
chartCriteria(myProject)

# Retrieve variables being used by existing chart
chartCriteria(myChart)

## End(Not run)

Sets the Chart type and axes

Description

Sets the Chart type and adds the variables to plot in the line chart.

Usage

chartData(
  chart,
  type = "Line",
  addX = NULL,
  addY = NULL,
  removeX = NULL,
  removeY = NULL,
  timesteps = NULL,
  iterationType = "Mean",
  iteration = 1
)

## S4 method for signature 'Chart'
chartData(
  chart,
  type = "Line",
  addX = NULL,
  addY = NULL,
  removeX = NULL,
  removeY = NULL,
  timesteps = NULL,
  iterationType = "Mean",
  iteration = 1
)

Arguments

Value

A Chart object representing a SyncroSim chart

Examples

## Not run: 
# Create a chart object
myChart <- chart(myProject, chart = "New Chart")

# Set the chart type and data
myChart <- chartData(myChart, y = c("variable1", "variable2"),
timesteps = c(0,10), iterationType = "single", iteration = 1)


## End(Not run)

Disaggregates the Chart by a Y variable

Description

Disaggregates the Chart by given filter column(s) in a Y variable.

Usage

chartDisagg(chart, variable, addFilter = NULL, removeFilter = NULL)

## S4 method for signature 'Chart'
chartDisagg(chart, variable, addFilter = NULL, removeFilter = NULL)

Arguments

Value

A Chart object representing a SyncroSim chart

Examples

## Not run: 
# Create a chart object
myChart <- chart(myProject, chart = "New Chart")

# Set the chart type and data
myChart <- chartData(myChart, y = c("variable1", "variable2"),
timesteps = c(0,10), iterationType = "single", iteration = 1)

# Disaggregate the chart by a filter column
myChart <- chartDisagg(myChart, variable = "variable1",
addFilter=c("col1", "col2"))

# Remove a filter column from the chart disaggregation
myChart <- chartDisagg(myChart, variable = "variable1",
removeFilter="col1")

## End(Not run)

Modify the error bars of a Chart

Description

Set the type and properties of the error bars of a Chart.

Usage

chartErrorBar(chart, type = NULL, lower = NULL, upper = NULL)

## S4 method for signature 'Chart'
chartErrorBar(chart, type = NULL, lower = NULL, upper = NULL)

Arguments

Value

A Chart object representing a SyncroSim chart or, if no arguments other than the chart are provided, a data.frame of the current chart error bar settings.

Examples

## Not run: 
# Open a chart object
myChart <- chart(myProject, chart = "My Chart")

# Set the chart error bars to display the minimum/maximum of the data
myChart <- chartErrorBar(myChart, type = "minmax")

# Disable the chart error bars
myChart <- chartErrorBar(myChart, type = "none")

# Set the chart error bars to display the 95th percentile error bars
myChart <- chartErrorBar(myChart, type = "percentile", lower = 2.5, 
                         upper = 97.5)

## End(Not run)

Description

Retrieves the Chart Id of a SyncroSim Chart.

Usage

chartId(ssimObject)

## S4 method for signature 'character'
chartId(ssimObject)

## S4 method for signature 'Chart'
chartId(ssimObject)

Arguments

Value

An integer: chart id.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set the SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, 
                         session = mySession, 
                         packages = "stsim",
                         overwrite = TRUE) 
myProject <- project(myLibrary, project = "Definitions")

# Get the chart object corresponding to the chart called "My Chart"
myChart <- chart(myProject, chart = "My Chart")

# Get Chart ID for SyncroSim Chart
chartId(myChart)

## End(Not run)

Add or remove values by column in a Chart

Description

Add or remove values by a specified column in the X or Y axis of a Chart.

Usage

chartInclude(
  chart,
  variable,
  filter,
  axis = "Y",
  addValue = NULL,
  removeValue = NULL
)

## S4 method for signature 'Chart'
chartInclude(
  chart,
  variable,
  filter,
  axis = "Y",
  addValue = NULL,
  removeValue = NULL
)

Arguments

Value

A Chart object representing a SyncroSim chart

Examples

## Not run: 
# Create a chart object
myChart <- chart(myProject, chart = "New Chart")

# Set the chart type and data
myChart <- chartData(myChart, y = c("variable1", "variable2"),
timesteps = c(0,10), iterationType = "single", iteration = 1)

# Include specific values in the chart
myChart <- chartInclude(myChart, variable = "variable1",
filter="col1", addValue=c("val1", "val2", "val3"))

# Remove specific values from the chart
myChart <- chartInclude(myChart, variable = "variable1",
filter="col1", removeValue="val3")

## End(Not run)

Modifies the font settings for a Chart

Description

Modifies the font style and size of various Chart components.

Usage

chartOptionsFont(
  chart,
  titleFont = NULL,
  titleStyle = NULL,
  titleSize = NULL,
  panelFont = NULL,
  panelStyle = NULL,
  panelSize = NULL,
  axisFont = NULL,
  axisStyle = NULL,
  axisSize = NULL,
  legendFont = NULL,
  legendStyle = NULL,
  legendSize = NULL
)

## S4 method for signature 'Chart'
chartOptionsFont(
  chart,
  titleFont = NULL,
  titleStyle = NULL,
  titleSize = NULL,
  panelFont = NULL,
  panelStyle = NULL,
  panelSize = NULL,
  axisFont = NULL,
  axisStyle = NULL,
  axisSize = NULL,
  legendFont = NULL,
  legendStyle = NULL,
  legendSize = NULL
)

Arguments

Value

A Chart object representing a SyncroSim chart or, if no arguments other than the chart are provided, a data.frame of the current chart font settings.

Examples

## Not run: 
# Open a chart object
myChart <- chart(myProject, chart = "My Chart")

# Set the font for the chart panels
myChart <- chartOptionsFont(myChart, panelFont = "Microsoft Sans Serif", 
                            panelStyle = "bold/italic", panelSize = 8)

# Return a dataframe of the current font settings
myChart <- chartOptionsFont(myChart)

## End(Not run)

Modifies the font settings for a Chart

Description

Modifies the font style and size of various Chart components.

Usage

chartOptionsFormat(
  chart,
  noDataAsZero = NULL,
  showDataPoints = NULL,
  showDataPointsOnly = NULL,
  showPanelTitles = NULL,
  showToolTips = NULL,
  showNoDataPanels = NULL,
  lineWidth = NULL
)

## S4 method for signature 'Chart'
chartOptionsFormat(
  chart,
  noDataAsZero = NULL,
  showDataPoints = NULL,
  showDataPointsOnly = NULL,
  showPanelTitles = NULL,
  showToolTips = NULL,
  showNoDataPanels = NULL,
  lineWidth = NULL
)

Arguments

Value

A Chart object representing a SyncroSim chart or, if no arguments other than the chart are provided, a data.frame of the current chart format settings.

Examples

## Not run: 
# Open a chart object
myChart <- chart(myProject, chart = "My Chart")

# Set the format for the chart panels
myChart <- chartOptionsFormat(myChart, noDataAsZero = TRUE, 
                              showDataPoints = FALSE, 
                              showDataPointsOnly = FALSE,
                              showPanelTitles = TRUE,
                              showToolTips = TRUE,
                              showNoDataPanels = FALSE,
                              lineWidth = 1)

# Return a dataframe of the current font settings
myChart <- chartOptionsFormat(myChart)

## End(Not run)

Modifies the legend settings for a Chart

Description

Modifies the legend settings for a Chart.

Usage

chartOptionsLegend(
  chart,
  show = NULL,
  showScenarioName = NULL,
  showScenarioId = NULL,
  showStageName = NULL,
  showTimestamp = NULL
)

## S4 method for signature 'Chart'
chartOptionsLegend(
  chart,
  show = NULL,
  showScenarioName = NULL,
  showScenarioId = NULL,
  showStageName = NULL,
  showTimestamp = NULL
)

Arguments

Value

A Chart object representing a SyncroSim chart or, if no arguments other than the chart are provided, a data.frame of the current chart legend settings.

Examples

## Not run: 
# Open a chart object
myChart <- chart(myProject, chart = "My Chart")

# Remove the scenario ID and the timestamp from the chart
myChart <- chartOptionsLegend(myChart, showScenarioId = FALSE, 
                              showTimestamp = FALSE)

# Hide the chart legend
myChart <- chartOptionsLegend(myChart, show = FALSE)

## End(Not run)

Modify the X Axis of a Chart

Description

Set the title and style of the X Axis of a Chart.

Usage

chartOptionsXAxis(
  chart,
  title = NULL,
  numberStyle = NULL,
  decimals = NULL,
  thousandsSeparator = NULL
)

## S4 method for signature 'Chart'
chartOptionsXAxis(
  chart,
  title = NULL,
  numberStyle = NULL,
  decimals = NULL,
  thousandsSeparator = NULL
)

Arguments

Value

A Chart object representing a SyncroSim chart or, if no arguments other than the chart are provided, a data.frame of the current chart X Axis settings.

Examples

## Not run: 
# Open a chart object
myChart <- chart(myProject, chart = "My Chart")

# Set the chart X Axis title
myChart <- chartOptionsXAxis(myChart, title = "Year")

# Return a dataframe of the current X Axis settings
myChart <- chartOptionsXAxis(myChart)

## End(Not run)

Modify the Y axis of a Chart

Description

Set the title and style of the Y axis of a Chart.

Usage

chartOptionsYAxis(
  chart,
  title = NULL,
  numberStyle = NULL,
  decimals = NULL,
  thousandsSeparator = NULL,
  minZero = NULL,
  sameScale = NULL,
  fixedIntervals = NULL
)

## S4 method for signature 'Chart'
chartOptionsYAxis(
  chart,
  title = NULL,
  numberStyle = NULL,
  decimals = NULL,
  thousandsSeparator = NULL,
  minZero = NULL,
  sameScale = NULL,
  fixedIntervals = NULL
)

Arguments

Value

A Chart object representing a SyncroSim chart or, if no arguments other than the chart are provided, a data.frame of the current chart Y axis settings.

Examples

## Not run: 
# Open a chart object
myChart <- chart(myProject, chart = "My Chart")

# Set the chart Y axis title
myChart <- chartOptionsYAxis(myChart, title = "Year")

# Return a dataframe of the current Y axis settings
myChart <- chartOptionsYAxis(myChart)

## End(Not run)

Description

This function issues a command to the SyncroSim console, and is mostly used internally by other functions.

Usage

command(
  args,
  session = NULL,
  program = "SyncroSim.Console.exe",
  wait = TRUE,
  progName = NULL
)

Arguments

Details

Example args, and the resulting character string passed to the SyncroSim console:

• Character string e.g. "–create –help": "–create –help"

• Named list or named vector e.g. list(name1=NULL,name2=value2): "–name1 –name2=value2"

• Unnamed list or unnamed vector e.g. c("create","help"): "–create –help"

Value

Character string: output from the SyncroSim program.

Examples

## Not run: 
# Install "stsim" if not already installed
installPackage("stsim")

# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib.ssim")

# Specify the command line arguments for creating a new stsim SsimLibrary
args <- list(create = NULL, library = NULL, 
             name = myLibraryName, 
             package = "stsim")
        
# Use a default session to create a new SsimLibrary in the current working directory
output <- command(args, session = session(printCmd = TRUE))
output

# Provide arguments to the command line using an unnamed vector
command(c("create", "help"))

# Provide arguments to the command line using a character string
command("--create --help")

# Provide arguments to the command line using a named list
command(list(create = NULL, help = NULL))

# Call on a different program to find all installed packages
command(list(installed = NULL), program = "SyncroSim.PackageManager.exe")

## End(Not run)

Description

Gets or sets the path to the Conda installation folder. Can be used to direct SyncroSim to a custom Conda installation.

Usage

condaFilepath(session)

## S4 method for signature 'Session'
condaFilepath(session)

## S4 method for signature 'missingOrNULLOrChar'
condaFilepath(session)

condaFilepath(session) <- value

## S4 replacement method for signature 'character'
condaFilepath(session) <- value

## S4 replacement method for signature 'Session'
condaFilepath(session) <- value

Arguments

Value

A character: the currently set filepath of the Conda installation folder.

Examples

## Not run: 
# Set up a SyncroSim Session
mySession <- session()

# Retrieve Conda installation path for the SyncroSim Session
condaFilepath(mySession)

# Set the Conda installation path for the SyncroSim Session
condaFilepath(mySession) <- "C:/miniconda3"

## End(Not run)

Description

Creates the conda environment for the specified SyncroSim package(s).

Usage

createCondaEnv(pkgs, session = NULL)

## S4 method for signature 'ANY,character'
createCondaEnv(pkgs, session = NULL)

## S4 method for signature 'ANY,missingOrNULL'
createCondaEnv(pkgs, session = NULL)

## S4 method for signature 'ANY,Session'
createCondaEnv(pkgs, session = NULL)

Arguments

Value

Invisibly returns TRUE upon success (i.e.successful creation of the conda environment(s)) or FALSE upon failure.

Examples

## Not run: 
# Set up a SyncroSim Session
mySession <- session()

# Create the conda environment for helloworldConda package
condaFilepath(pkgs = "helloworldConda", mySession)

## End(Not run)

Description

This function retrieves a SyncroSim Datasheet, either by calling the SyncroSim console, or by directly querying the SsimLibrary database.

Usage

datasheet(
  ssimObject,
  name = NULL,
  project = NULL,
  scenario = NULL,
  summary = NULL,
  optional = FALSE,
  empty = FALSE,
  filterColumn = NULL,
  filterValue = NULL,
  lookupsAsFactors = TRUE,
  sqlStatement = list(select = "SELECT *", groupBy = ""),
  includeKey = FALSE,
  forceElements = FALSE,
  fastQuery = FALSE,
  returnScenarioInfo = FALSE,
  returnInvisible = FALSE,
  rawValues = FALSE,
  verbose = TRUE
)

## S4 method for signature 'list'
datasheet(
  ssimObject,
  name = NULL,
  project = NULL,
  scenario = NULL,
  summary = NULL,
  optional = FALSE,
  empty = FALSE,
  filterColumn = NULL,
  filterValue = NULL,
  lookupsAsFactors = TRUE,
  sqlStatement = list(select = "SELECT *", groupBy = ""),
  includeKey = FALSE,
  forceElements = FALSE,
  fastQuery = FALSE,
  returnScenarioInfo = FALSE,
  returnInvisible = FALSE,
  rawValues = FALSE,
  verbose = TRUE
)

## S4 method for signature 'character'
datasheet(
  ssimObject,
  name,
  project,
  scenario,
  summary,
  optional,
  empty,
  filterColumn,
  filterValue,
  lookupsAsFactors,
  sqlStatement,
  includeKey,
  fastQuery,
  returnScenarioInfo,
  returnInvisible,
  rawValues,
  verbose
)

## S4 method for signature 'SsimObject'
datasheet(
  ssimObject,
  name = NULL,
  project = NULL,
  scenario = NULL,
  summary = NULL,
  optional = FALSE,
  empty = FALSE,
  filterColumn = NULL,
  filterValue = NULL,
  lookupsAsFactors = TRUE,
  sqlStatement = list(select = "SELECT *", groupBy = ""),
  includeKey = FALSE,
  forceElements = FALSE,
  fastQuery = FALSE,
  returnScenarioInfo = FALSE,
  returnInvisible = FALSE,
  rawValues = FALSE,
  verbose = TRUE
)

Arguments

Details

If summary=TRUE or summary=NULL and name=NULL a data.frame describing the Datasheets is returned. If optional=TRUE, columns include: scope, packages, name, displayName, isSingle, data. data only displayed for a SyncroSim Scenario. dataInherited and dataSource columns added if a Scenario has dependencies. If optional=FALSE, columns include: scope, name, displayName. All other arguments are ignored.

Otherwise, for each element in name a Datasheet is returned as follows:

• If lookupsAsFactors=TRUE (default): Each column is given the correct data type, and dependencies returned as factors with allowed values (levels). A warning is issued if the lookup has not yet been set.

• If empty=TRUE: Each column is given the correct data type. Fast (1 less console command).

• If empty=FALSE and lookupsAsFactors=FALSE: Column types are not checked, and the optional argument is ignored. Fast (1 less console command).

• If SsimObject is a list of Scenario or Project objects (output from run, Scenario or Project): Adds ScenarioId/ProjectId column if appropriate.

• If Scenario/Project is a vector: Adds ScenarioId/ProjectId column as necessary.

• If requested Datasheet has Scenario scope and contains info from more than one Scenario: ScenarioId/ScenarioName/ScenarioParent columns identify the Scenario by name, id, and parent (if a result Scenario).

• If requested Datasheet has Project scope and contains info from more than one Project: ProjectId/ProjectName columns identify the Project by name and id

Value

If summary=TRUE returns a data.frame of Datasheet names and other information, otherwise returns a data.frame or list of these.

Examples

## Not run: 
# Install helloworldSpatial package from package server
installPackage("helloworldSpatial")

# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib_datasheet")

# Set the SyncroSim Session
mySession <- session()

# Create a new SsimLibrary with the example template from helloworldSpatial
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession, 
                         packages = "helloworldSpatial")
                         
# Set the Project and Scenario
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Get all Datasheet info for the Scenario
myDatasheets <- datasheet(myScenario)


# Return a list of data.frames (1 for each Datasheet)
myDatasheetList <- datasheet(myScenario, summary = FALSE)

# Get a specific Datasheet
myDatasheet <- datasheet(myScenario, name = "helloworldSpatial_RunControl")

# Include primary key when retrieving a Datasheet
myDatasheet <- datasheet(myScenario, name = "helloworldSpatial_RunControl", 
                         includeKey = TRUE)

# Return all columns, including optional ones
myDatasheet <- datasheet(myScenario, name = "helloworldSpatial_RunControl", 
                         summary = TRUE, optional = TRUE)

# Return Datasheet as an element
myDatasheet <- datasheet(myScenario, name = "helloworldSpatial_RunControl", 
                         forceElements = TRUE)
myDatasheet$helloworldSpatial_RunControl

# Get a Datasheet without pre-specified values
myDatasheetEmpty <- datasheet(myScenario, 
                              name = "helloworldSpatial_RunControl", 
                              empty = TRUE)

# If Datasheet is empty, do not return dependencies as factors
myDatasheetEmpty <- datasheet(myScenario, 
                              name = "helloworldSpatial_RunControl", 
                              empty = TRUE,
                              lookupsAsFactors = FALSE)
                              
# Optimize query
myDatasheet <- datasheet(myScenario, name = "helloworldSpatial_RunControl", 
                         fastQuery = TRUE)

# Get specific SsimLibrary core Datasheet
myDatasheet <- datasheet(myLibrary, name = "core_Backup")

# Use an SQL statement to query a Datasheet
mySQL <- sqlStatement(
  groupBy = c("ScenarioId"),
  aggregate = c("MinimumTimestep"),
  where = list(MinimumTimestep = c(1))
)
myAggregatedDatasheet <- datasheet(myScenario, 
                                   name = "helloworldSpatial_RunControl",
                                   sqlStatement = mySQL)

## End(Not run)

Description

This function retrieves spatial columns from one or more SyncroSim Scenario Datasheets.

Usage

datasheetSpatRaster(
  ssimObject,
  datasheet,
  column = NULL,
  scenario = NULL,
  iteration = NULL,
  timestep = NULL,
  filterColumn = NULL,
  filterValue = NULL,
  subset = NULL,
  forceElements = FALSE,
  pathOnly = FALSE
)

## S4 method for signature 'character'
datasheetSpatRaster(
  ssimObject,
  datasheet,
  column = NULL,
  scenario = NULL,
  iteration = NULL,
  timestep = NULL,
  filterColumn = NULL,
  filterValue = NULL,
  subset = NULL,
  forceElements = FALSE,
  pathOnly = FALSE
)

## S4 method for signature 'list'
datasheetSpatRaster(
  ssimObject,
  datasheet,
  column = NULL,
  scenario = NULL,
  iteration = NULL,
  timestep = NULL,
  filterColumn = NULL,
  filterValue = NULL,
  subset = NULL,
  forceElements = FALSE,
  pathOnly = FALSE
)

## S4 method for signature 'SsimObject'
datasheetSpatRaster(
  ssimObject,
  datasheet,
  column = NULL,
  scenario = NULL,
  iteration = NULL,
  timestep = NULL,
  filterColumn = NULL,
  filterValue = NULL,
  subset = NULL,
  forceElements = FALSE,
  pathOnly = FALSE
)

## S4 method for signature 'Scenario'
datasheetSpatRaster(
  ssimObject,
  datasheet,
  column = NULL,
  scenario = NULL,
  iteration = NULL,
  timestep = NULL,
  filterColumn = NULL,
  filterValue = NULL,
  subset = NULL,
  forceElements = FALSE,
  pathOnly = FALSE
)

Arguments

Details

The names of the returned SpatRaster contain metadata. For Datasheets without Filename this is:

paste0(<datasheet name>,".Scn",<scenario id>,".",<tif name>).

For Datasheets containing Filename this is:

paste0(<datasheet name>,".Scn",<scenario id>,".It",<iteration>,".Ts",<timestep>).

Value

A SpatRaster object, or List. See terra package documentation for details.

Examples

## Not run: 
# Install the helloworldSpatial package from the server
installPackage("helloworldSpatial")

# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib_datasheetSpatRaster")

# Set up a SyncroSim Session
mySession <- session()

# Use the example template library from helloworldSpatial
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession,
                         packages = "helloworldSpatial")

# Set up Project and Scenario
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Run Scenario to generate results
resultScenario <- run(myScenario)

# Extract specific Datasheet rasters by iteration and timestep
resultRaster <- datasheetSpatRaster(resultScenario,
                  datasheet = "helloworldSpatial_IntermediateDatasheet",
                  column = "OutputRasterFile",
                  iteration = 3,
                  timestep = 2
)

# Extract specific Datasheet SpatRasters using pattern matching
resultDatasheet <- datasheet(resultScenario, 
                             name = "helloworldSpatial_IntermediateDatasheet")
colnames(resultDatasheet)
outputRasterPaths <- resultDatasheet$OutputRasterFile
resultRaster <- datasheetSpatRaster(resultScenario, 
                  datasheet = "helloworldSpatial_IntermediateDatasheet",
                  column = "OutputRasterFile",
                  subset = expression(grepl("ts20", 
                                             outputRasterPaths,
                                             fixed = TRUE))
)

# Return the raster Datasheets as a SpatRaster list
resultRaster <- datasheetSpatRaster(resultScenario, 
                 datasheet = "helloworldSpatial_IntermediateDatasheet",
                 column = "OutputRasterFile",
                 forceElements = TRUE)
                 
# Filter for only rasters that fit specific criteria
# Load the ST-Sim spatial example library
installPackage("stsim")

# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib_stsim_datasheet")

# Set the SyncroSim Session
mySession <- session()

# Create a new SsimLibrary with the example template from ST-Sim
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession, 
                         packages = "stsim")
                         
myScenario <- scenario(myLibrary, scenario = 16)

# Run Scenario to generate results
resultScenario <- run(myScenario)


resultRaster <- datasheetSpatRaster(resultScenario,
                 datasheet = "stsim_OutputSpatialState",
                 timestep = 5,
                 iteration = 5,
                 filterColumn = "TransitionTypeID",
                 filterValue = "Fire")

## End(Not run)

Description

The most recent modification date of a SsimLibrary, Project, Scenario or Folder.

Usage

dateModified(ssimObject)

## S4 method for signature 'character'
dateModified(ssimObject)

## S4 method for signature 'SsimLibrary'
dateModified(ssimObject)

## S4 method for signature 'Project'
dateModified(ssimObject)

## S4 method for signature 'Scenario'
dateModified(ssimObject)

## S4 method for signature 'Folder'
dateModified(ssimObject)

Arguments

Value

A character string: date and time of the most recent modification to the SsimObject provided as input.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session and SsimLibrary
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Check the last date of modification of the SsimLibrary
dateModified(myLibrary)

## End(Not run)

Description

Deletes one or more items. Note that this is irreversible.

Usage

delete(
  ssimObject,
  project = NULL,
  scenario = NULL,
  folder = NULL,
  chart = NULL,
  datasheet = NULL,
  force = FALSE,
  removeBackup = FALSE,
  removePublish = FALSE,
  removeCustom = FALSE,
  session = NULL
)

## S4 method for signature 'character'
delete(
  ssimObject,
  project = NULL,
  scenario = NULL,
  folder = NULL,
  chart = NULL,
  datasheet = NULL,
  force = FALSE,
  removeBackup = FALSE,
  removePublish = FALSE,
  removeCustom = FALSE,
  session = NULL
)

## S4 method for signature 'SsimObject'
delete(ssimObject, project, scenario, folder, chart, datasheet, force, session)

Arguments

Value

Invisibly returns a list of boolean values corresponding to each input: TRUE upon success (i.e.successful deletion) and FALSE upon failure.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "a project")

# Check the Projects associated with this SsimLibrary
project(myLibrary)

# Delete Project
delete(myLibrary, project = "a project", force = TRUE)

# Check that Project was successfully deleted from SsimLibrary
project(myLibrary)

## End(Not run)

Description

Deletes a SyncroSim library. Note this is irreversable.

Usage

deleteLibrary(
  ssimLibrary,
  force = FALSE,
  removeBackup = FALSE,
  removePublish = FALSE,
  removeCustom = FALSE,
  session = NULL
)

## S4 method for signature 'SsimLibrary'
deleteLibrary(ssimLibrary, force, removeBackup, removePublish, removeCustom)

## S4 method for signature 'character'
deleteLibrary(
  ssimLibrary,
  force = FALSE,
  removeBackup = FALSE,
  removePublish = FALSE,
  removeCustom = FALSE,
  session = NULL
)

Arguments

Value

"saved" or failure message.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session and create SsimLibrary
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
 
# Delete library from SsimObject
deleteLibrary(myLibrary, force = TRUE, removeBackup = TRUE)

# Create another library
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Delete library from path
deleteLibrary(myLibraryName)

## End(Not run)

Description

List dependencies, set dependencies, or remove dependencies from a SyncroSim Scenario. Setting dependencies is a way of linking together Scenario Datafeeds, such that a change in the Scenario that is the source dependency will update the dependent Scenario as well.

Usage

dependency(ssimObject)

## S4 method for signature 'character'
dependency(ssimObject)

## S4 method for signature 'Scenario'
dependency(ssimObject)

dependency(ssimObject) <- value

## S4 replacement method for signature 'Scenario'
dependency(ssimObject) <- value

Arguments

Details

If dependency==NULL, other arguments are ignored, and set of existing dependencies is returned in order of precedence (from highest to lowest precedence). Otherwise, returns list of saved or error messages for each dependency of each scenario.

Note that the order of dependencies can be important - dependencies added most recently take precedence over existing dependencies. So, dependencies included in the dependency argument take precedence over any other existing dependencies. If the dependency argument includes more than one element, elements are ordered from lowest to highest precedence.

Value

A data.frame: all dependencies for a given Scenario

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, Project, and 2 Scenarios
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")
myNewScenario <- scenario(myProject,
                          scenario = "my New Scenario")

# Set myScenario as a dependency of myNewScenario
dependency(myNewScenario) <- myScenario

# Get all dependencies info
dependency(myNewScenario)

# Remove all dependencies
dependency(myNewScenario) <- c()

## End(Not run)

Description

Get or set the description of a SsimLibrary, Project, or Scenario.

Usage

description(ssimObject)

description(ssimObject) <- value

## S4 method for signature 'character'
description(ssimObject)

## S4 method for signature 'SsimObject'
description(ssimObject)

## S4 replacement method for signature 'character'
description(ssimObject) <- value

## S4 replacement method for signature 'SsimObject'
description(ssimObject) <- value

Arguments

Value

A character string: the description of the SsimObject

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")

# Retrieve the description of the SyncroSim Project
mydescription <- description(myProject)

# Set the description of the SyncroSim Project
description(myProject) <- "my description"

## End(Not run)

Description

Retrieves the path to a SyncroSim Session, SsimLibrary, Project, Scenario, of Folder on disk.

Usage

filepath(ssimObject)

## S4 method for signature 'character'
filepath(ssimObject)

## S4 method for signature 'Session'
filepath(ssimObject)

## S4 method for signature 'SsimObject'
filepath(ssimObject)

## S4 method for signature 'Folder'
filepath(ssimObject)

Arguments

Value

A character string: the path to a SyncroSim object on disk.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session and SsimLibrary
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Get the file path
myFilePath <- filepath(myLibrary)

## End(Not run)

Description

Create or open a Folder from a SyncroSim Project.

Usage

folder(
  ssimObject = NULL,
  folder = NULL,
  parentFolder = NULL,
  summary = FALSE,
  create = FALSE
)

Arguments

Value

A Folder object representing a SyncroSim folder.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession) 
myProject <- project(myLibrary, project = "My Project")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Create a new folder
myFolder <- folder(myProject, folder = "New Folder")

# Create a nested folder within "New Folder"
myNestedFolder <- folder(myProject, folder = "New Nested Folder", 
                         parentFolder = myFolder)
                         
# Retrieve a dataframe of all folders in a project
folder(myProject)

## End(Not run)

Description

Folder object representing a SyncroSim Folder. A Folder is used to organize SyncroSim Scenarios within a Project, and can be nested within other Folders at the project-level. These are used mostly in the SyncroSim User Interface.

Slots

session

Session object. The Session associated with the Folder's SsimLibrary

filepath

character string. The path to the Folder's SsimLibrary on disk

folderId

integer. The Folder id

parentId

integer. The parent Folder id (if the folder is nested)

projectId

integer. The Project id

See Also

See folder for options when creating or loading a SyncroSim Folder

Description

Retrieves the Folder Id of a SyncroSim Folder or Scenario. Can also use to set the Folder Id for a Scenario - this will move the Scenario into the desired folder in the SyncroSim User Interface.

Usage

folderId(ssimObject)

## S4 method for signature 'character'
folderId(ssimObject)

## S4 method for signature 'Folder'
folderId(ssimObject)

## S4 method for signature 'Scenario'
folderId(ssimObject)

folderId(ssimObject) <- value

## S4 replacement method for signature 'Scenario'
folderId(ssimObject) <- value

Arguments

Value

An integer: folder id.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, 
                         session = mySession, 
                         overwrite = TRUE) 
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")
myFolder <- folder(myProject, "New Folder")

# Get Folder ID for SyncroSim Folder and Scenario
folderId(myFolder)
folderId(myScenario)

# Move the Scenario into the newly created folder
folderId(myScenario) <- folderId(myFolder)
folderId(myScenario)

## End(Not run)

Description

Retrieves or sets the Datafeeds to ignore for a Scenario.

Usage

ignoreDependencies(ssimObject)

## S4 method for signature 'character'
ignoreDependencies(ssimObject)

## S4 method for signature 'Scenario'
ignoreDependencies(ssimObject)

ignoreDependencies(ssimObject) <- value

## S4 replacement method for signature 'character'
ignoreDependencies(ssimObject) <- value

## S4 replacement method for signature 'Scenario'
ignoreDependencies(ssimObject) <- value

Arguments

Value

A character string: Scenario Datafeeds that will be ignored.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# List the Datafeeds to ignore
ignoreDependencies(myScenario)

# Set Scenario Datafeeds to ignore
ignoreDependencies(myScenario) <- "stsim_RunControl,stsim_TransitionTarget"

## End(Not run)

Description

Retrieves some basic metadata about a SsimLibrary: Name, Owner, Last Modified, Size, Read Only, Data files, Publish files, Temporary files, Backup files, and Use conda.

Usage

info(ssimLibrary)

## S4 method for signature 'SsimLibrary'
info(ssimLibrary)

Arguments

Value

Returns a data.frame with information on the properties of the SsimLibrary object.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session and SsimLibrary
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Get information about SsimLibrary  
info(myLibrary)

## End(Not run)

Description

This function installs Miniconda to the default installation path within the SyncroSim installation folder. If you already have Conda installed in the non-default location, you can point SyncroSim towards that installation using the condaFilepath function.

Usage

installConda(session)

## S4 method for signature 'character'
installConda(session)

## S4 method for signature 'missingOrNULL'
installConda(session)

## S4 method for signature 'Session'
installConda(session)

Arguments

Value

Invisibly returns TRUE upon success (i.e.successful install) and FALSE upon failure.

Examples

## Not run: 
# Install Conda for the default SyncroSim session
installConda()

## End(Not run)

Description

This function installs a package to the SyncroSim Session. If only the package name is provided as input, the function queries the SyncroSim package server for the specified package. If a file path is provided as input, the function installs a package to SyncroSim from a local package file (ends in ".ssimpkg"). The list of SyncroSim packages can be found here.

Usage

installPackage(packages, versions = NULL, session = NULL)

## S4 method for signature 'ANY,ANY,character'
installPackage(packages, versions = NULL, session = NULL)

## S4 method for signature 'ANY,ANY,missingOrNULL'
installPackage(packages, versions = NULL, session = NULL)

## S4 method for signature 'ANY,ANY,Session'
installPackage(packages, versions = NULL, session = NULL)

Arguments

Value

Invisibly returns TRUE upon success (i.e.successful install) and FALSE upon failure.

Examples

## Not run: 
# Create a new SyncroSim Session
mySession <- session()

# Install package from the package server
installPackage(packages="stsim", versions="4.0.1", session = mySession)

# Install package using a local file path
installPackage("c:/path/to/stsim.ssimpkg")

## End(Not run)

Description

Retrieves or sets whether or not a Scenario is configured to merge dependencies at run time.

Usage

mergeDependencies(ssimObject)

## S4 method for signature 'character'
mergeDependencies(ssimObject)

## S4 method for signature 'Scenario'
mergeDependencies(ssimObject)

mergeDependencies(ssimObject) <- value

## S4 replacement method for signature 'character'
mergeDependencies(ssimObject) <- value

## S4 replacement method for signature 'Scenario'
mergeDependencies(ssimObject) <- value

Arguments

Value

A logical: TRUE if the scenario is configured to merge dependencies at run time, and FALSE otherwise.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set up a SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Retrieve whether or not dependencies will be merged for a Scenario
mergeDependencies(myScenario)

# Set whether or not dependencies will be merged for a Scenario
mergeDependencies(myScenario) <- TRUE

## End(Not run)

Description

Retrieves or sets the name of a SsimLibrary, Project, Scenario, or Folder.

Usage

name(ssimObject)

## S4 method for signature 'character'
name(ssimObject)

## S4 method for signature 'SsimLibrary'
name(ssimObject)

## S4 method for signature 'Scenario'
name(ssimObject)

## S4 method for signature 'Project'
name(ssimObject)

## S4 method for signature 'Folder'
name(ssimObject)

## S4 method for signature 'Chart'
name(ssimObject)

name(ssimObject) <- value

## S4 replacement method for signature 'character'
name(ssimObject) <- value

## S4 replacement method for signature 'SsimLibrary'
name(ssimObject) <- value

## S4 replacement method for signature 'Project'
name(ssimObject) <- value

## S4 replacement method for signature 'Scenario'
name(ssimObject) <- value

## S4 replacement method for signature 'Folder'
name(ssimObject) <- value

## S4 replacement method for signature 'Chart'
name(ssimObject) <- value

Arguments

Value

A character string: the name of the SsimObject.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, 
                         session = mySession,
                         packages = "stsim")
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")
myFolder <- folder(myProject, folder = "New Folder")
myChart <- chart(myProject, chart = "New Chart")

# Retrieve names of the SsimObjects
name(myLibrary)
name(myProject)
name(myScenario)
name(myFolder)
name(myChart)

# Set the name of the SyncroSim Scenario
name(myScenario) <- "My Scenario Name"

## End(Not run)

Description

Retrieves or sets the owner of a SsimLibrary, Project, or Scenario.

Usage

owner(ssimObject)

owner(ssimObject) <- value

## S4 method for signature 'character'
owner(ssimObject)

## S4 method for signature 'SsimLibrary'
owner(ssimObject)

## S4 method for signature 'Project'
owner(ssimObject)

## S4 method for signature 'Scenario'
owner(ssimObject)

## S4 replacement method for signature 'character'
owner(ssimObject) <- value

## S4 replacement method for signature 'SsimObject'
owner(ssimObject) <- value

Arguments

Value

A character string: the owner of the SsimObject.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Retrieve the owner of an SsimObject
owner(myLibrary)
owner(myProject)
owner(myScenario)

# Set the owner of a SyncroSim Scenario
owner(myScenario) <- "Apex RMS"

## End(Not run)

Description

Retrieves the packages installed or available in the current session if called on a Session object, or the packages added to a SyncroSim Library if called on a SsimLibrary object.

Usage

packages(ssimObject = NULL, installed = TRUE)

## S4 method for signature 'character'
packages(ssimObject = NULL, installed = TRUE)

## S4 method for signature 'missingOrNULL'
packages(ssimObject = NULL, installed = TRUE)

## S4 method for signature 'Session'
packages(ssimObject = NULL, installed = TRUE)

## S4 method for signature 'SsimLibrary'
packages(ssimObject)

Arguments

Value

Returns a data.frame of packages installed or templates available for a specified package.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session and SsimLibrary
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# List all installed packages
packages(mySession)

# List all available packages on the server (including currently installed)
packages(installed = FALSE)
 
# Check the package(s) in your SsimLibrary
packages(myLibrary)

## End(Not run)

Description

Retrieves the id of the parent of a SyncroSim results Scenario or a SyncroSim Folder.

Usage

parentId(child)

## S4 method for signature 'character'
parentId(child)

## S4 method for signature 'Scenario'
parentId(child)

## S4 method for signature 'Folder'
parentId(child)

Arguments

Value

An integer id of the parent Scenario if input is a Scenario, or an integer id of the parent Folder if input is a Folder. If the input Scenario or Folder does not have a parent, the function returns NA

Examples

## Not run: 
# Set the file path and name of an existing SsimLibrary
myLibraryName <- "MyLibrary.ssim"

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Run Scenario to generate results
resultScenario <- run(myScenario)

# Find the parent ID of the Scenario
parentId(resultScenario)

## End(Not run)

Description

Retrieves a printCmd setting of a Session object. The printCmd setting configures a Session for printing commands sent to the console.

Usage

printCmd(session = NULL)

## S4 method for signature 'Session'
printCmd(session = NULL)

## S4 method for signature 'missingOrNULLOrChar'
printCmd(session = NULL)

Arguments

Value

A logical : TRUE if the session is configured to print commands and FALSE if it is not.

Examples

## Not run: 
# Set SyncroSim Session
mySession <- session()

# Retrieve printCmd settings for given Session
printCmd(mySession)

## End(Not run)

Description

This function is designed to facilitate the development of R-based Syncrosim Packages, such as beginning, stepping, ending, and reporting the progress for a SyncroSim simulation.

Usage

progressBar(
  type = "step",
  iteration = NULL,
  timestep = NULL,
  totalSteps = NULL,
  message
)

Arguments

Value

No returned value, used for side effects

Examples

## Not run: 
# Begin the progress bar for a simulation
progressBar(type = "begin", totalSteps = numIterations * numTimesteps)

# Increase the progress bar by one step for a simulation
progressBar(type = "step")

# Report progress for a simulation
progressBar(type = "report", iteration = iter, timestep = ts)

# Report arbitrary progress message 
progressBar(type = "message", message = msg)

# End the progress bar for a simulation
progressBar(type = "end")

## End(Not run)

Description

Creates or retrieves a Project or multiple Projects from a SsimLibrary.

Usage

project(
  ssimObject = NULL,
  project = NULL,
  sourceProject = NULL,
  summary = NULL,
  forceElements = FALSE,
  overwrite = FALSE
)

Arguments

Details

For each element of project:

• If element identifies an existing Project: Returns the existing Project.

• If element identifies more than one Project: Error.

• If element does not identify an existing Project: Creates a new Project named element. Note that SyncroSim automatically assigns an id to a new Project.

Value

Returns a Project object representing a SyncroSim Project. If summary is TRUE, returns a data.frame of Project names and descriptions.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib_project")

# Set the SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession) 
myProject <- project(ssimObject = myLibrary, project = "My project name")
myproject2 <- project(ssimObject = myLibrary, project = "My new project name")

# Get a named list of existing Projects
# Each element in the list is named by a character version of the Project ID
myProjects <- project(myLibrary, summary = FALSE)
names(myProjects)

# Get an existing Project.
myProject <- myProjects[[1]]
myProject <- project(myLibrary, project = "My new project name")

# Get/set the Project properties
name(myProject)
name(myProject) <- "New project name"

# Create a new Project from a copy of an existing Project
myNewProject <- project(myLibrary, project = "My copied project",
                        sourceProject = 1)

# Overwrite an existing Project
myNewProject <- project(myLibrary, project = "My copied project",
                        overwrite = TRUE)

## End(Not run)

Description

Project object representing a SyncroSim Project. A Project is the intermediate level of organization in the SyncroSim workflow, between the ssimLibrary and the scenario. It contains information relevant to a group of Scenarios.

Slots

session

Session object. The Session associated with the Project's SsimLibrary

filepath

character string. The path to the Project's SsimLibrary on disk

datasheetNames

Names and scopes of datasheets in the Project's Library

projectId

integer. The Project id

See Also

See project for options when creating or loading a SyncroSim Project.

Description

Retrieves the projectId of a SyncroSim Project, Scenario, Folder or Chart.

Usage

projectId(ssimObject)

## S4 method for signature 'character'
projectId(ssimObject)

## S4 method for signature 'Project'
projectId(ssimObject)

## S4 method for signature 'Scenario'
projectId(ssimObject)

## S4 method for signature 'Folder'
projectId(ssimObject)

## S4 method for signature 'Chart'
projectId(ssimObject)

Arguments

Value

An integer: project id.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession) 
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Get Project ID for SyncroSim Project and Scenario
projectId(myProject)
projectId(myScenario)

## End(Not run)

Description

Retrieves or sets whether or not a SsimLibrary, Project, Scenario, or Folder is read-only.

Usage

readOnly(ssimObject)

## S4 method for signature 'character'
readOnly(ssimObject)

## S4 method for signature 'SsimLibrary'
readOnly(ssimObject)

## S4 method for signature 'Project'
readOnly(ssimObject)

## S4 method for signature 'Scenario'
readOnly(ssimObject)

## S4 method for signature 'Folder'
readOnly(ssimObject)

## S4 method for signature 'Chart'
readOnly(ssimObject)

readOnly(ssimObject) <- value

## S4 replacement method for signature 'character'
readOnly(ssimObject) <- value

## S4 replacement method for signature 'SsimObject'
readOnly(ssimObject) <- value

## S4 replacement method for signature 'Folder'
readOnly(ssimObject) <- value

## S4 replacement method for signature 'Chart'
readOnly(ssimObject) <- value

Arguments

Value

A logical: TRUE if the SsimObject is read-only and FALSE otherwise.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, Project, Scenario, and Folder
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")
myFolder <- folder(myProject, "My Folder")

# Retrieve the read-only status of a SsimObject
readOnly(myLibrary)
readOnly(myProject)
readOnly(myScenario)
readOnly(myFolder)

# Set the read-only status of a SsimObject
readOnly(myScenario) <- TRUE

## End(Not run)

Description

Removes package(s) from a SsimLibrary.

Usage

removePackage(ssimLibrary, packages)

## S4 method for signature 'character'
removePackage(ssimLibrary, packages)

## S4 method for signature 'SsimLibrary'
removePackage(ssimLibrary, packages)

Arguments

Value

This function invisibly returns TRUE upon success (i.e.successful removal of the package) or FALSE upon failure.

See Also

packages

Examples

## Not run: 
# Install "stsim" and "stsimecodep" SyncroSim packages
installPackage("stsim")
installPackage("stsimecodep")

# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)

# Add package
addPackage(myLibrary, packages = "stsim", versions = "4.0.1")
addPackage(myLibrary, packages = "stsimecodep")
packages(myLibrary)

# Remove package
removePackage(myLibrary, packages = c("stsim", "stsimecodep"))
packages(myLibrary)

## End(Not run)

Description

rsyncrosim provides an interface to SyncroSim, a generalized framework for running and managing scenario-based stochastic simulations over space and time. Different kinds of simulation models can "plug-in" to SyncroSim as packages and take advantage of general features common to many kinds of simulation models, such as defining scenarios of inputs, running Monte Carlo simulations, and viewing charts and maps of outputs.

Details

To learn more about rsyncrosim, start with the vignette tutorial: browseVignettes("rsyncrosim").

Author(s)

Maintainer: Katie Birchard [email protected]

Authors:

• Colin Daniel [email protected]

• Josie Hughes [email protected]

• Valentin Lucet

• Alex Embrey

• Leonardo Frid

• Tabitha Kennedy

• Shreeram Senthivasan

Other contributors:

• ApexRMS [copyright holder]

See Also

Useful links:

• https://syncrosim.github.io/rsyncrosim/

• Report bugs at https://github.com/syncrosim/rsyncrosim/issues/

Description

Run one or more SyncroSim Scenario(s).

Usage

run(
  ssimObject,
  scenario = NULL,
  summary = FALSE,
  copyExternalInputs = FALSE,
  transformerName = NULL
)

## S4 method for signature 'character'
run(
  ssimObject,
  scenario = NULL,
  summary = FALSE,
  copyExternalInputs = FALSE,
  transformerName = NULL
)

## S4 method for signature 'list'
run(
  ssimObject,
  scenario = NULL,
  summary = FALSE,
  copyExternalInputs = FALSE,
  transformerName = NULL
)

## S4 method for signature 'SsimObject'
run(
  ssimObject,
  scenario = NULL,
  summary = FALSE,
  copyExternalInputs = FALSE,
  transformerName = NULL
)

Arguments

Details

Note that breakpoints are ignored unless the SsimObject is a single Scenario.

Value

If summary = FALSE, returns a result Scenario object or a named list of result Scenarios. The name is the parent Scenario for each result. If summary = TRUE, returns summary info for result Scenarios.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- "testlib"

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
myLibrary <- ssimLibrary(name = myLibraryName,
                         packages = "helloworldSpatial")
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")
myScenario2 <- scenario(myProject, scenario = "My Scenario 2")

# Run with default parameters
resultScenario <- run(myScenario)

# Only return summary information
resultScenarioSummary <- run(myScenario, summary = TRUE)

# Run 2 scenarios at once
resultScenarios <- run(c(myScenario, myScenario2))

## End(Not run)

Description

Retrieves the run log of a result Scenario.

Usage

runLog(scenario)

## S4 method for signature 'character'
runLog(scenario)

## S4 method for signature 'Scenario'
runLog(scenario)

Arguments

Value

A character string: the run log for a result scenario.

Examples

## Not run: 
# Set the file path and name of an existing SsimLibrary
myLibraryName <- file.path("MyLibrary.ssim")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Run Scenario
resultScenario <- run(myScenario)

# Retrieve the run log of the result Scenario
runLog(resultScenario)

## End(Not run)

Description

This function is part of a set of functions designed to facilitate the development of R-based Syncrosim Packages. This function creates and returns a SyncroSim Data Folder.

Usage

runtimeDataFolder(scenario, datasheetName)

Arguments

Value

Returns a data folder name for the specified datasheet.

Examples

## Not run: 
dataFolder <- runtimeDataFolder()

## End(Not run)

Description

This function is part of a set of functions designed to facilitate the development of R-based Syncrosim Packages. This function creates and returns a SyncroSim Temporary Folder.

Usage

runtimeTempFolder(folderName)

Arguments

Value

Returns a temporary folder name.

Examples

## Not run: 
tempFolder <- runtimeTempFolder()

## End(Not run)

Description

Saves Datasheets to a SsimLibrary, Project, or Scenario.

Usage

saveDatasheet(
  ssimObject,
  data,
  name = NULL,
  fileData = NULL,
  append = NULL,
  forceElements = FALSE,
  force = FALSE,
  breakpoint = FALSE,
  import = TRUE,
  path = NULL
)

## S4 method for signature 'character'
saveDatasheet(
  ssimObject,
  data,
  name = NULL,
  fileData = NULL,
  append = NULL,
  forceElements = FALSE,
  force = FALSE,
  breakpoint = FALSE,
  import = TRUE,
  path = NULL
)

## S4 method for signature 'SsimObject'
saveDatasheet(
  ssimObject,
  data,
  name = NULL,
  fileData = NULL,
  append = NULL,
  forceElements = FALSE,
  force = FALSE,
  breakpoint = FALSE,
  import = TRUE,
  path = NULL
)

Arguments

Details

SsimObject/Project/Scenario should identify a single SsimObject.

If fileData != NULL, each element of names(fileData) should correspond uniquely to at most one entry in data. If a name is not found in data the element will be ignored with a warning. If names(fileData) are full filepaths, rsyncrosim will write each object to the corresponding path for subsequent loading by SyncroSim. Note this is generally more time-consuming because the files must be written twice. If names(fileData) are not filepaths (faster, recommended), rsyncrosim will write each element directly to the appropriate SyncroSim input/output folders. rsyncrosim will write each element of fileData directly to the appropriate SyncroSim input/output folders. If fileData != NULL, data should be a data.frame, vector, or list of length 1, not a list of length >1.

About the 'append' argument:

• A Datasheet is a VALIDATION SOURCE if its data can be used to validate column values in a different Datasheet.

• The append argument will be ignored if the Datasheet is a validation source and has a Project scope. In this case the data will be MERGED.

Value

Invisibly returns a vector or list of logical values for each input: TRUE upon success (i.e.successful save) and FALSE upon failure.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession,
                         packages = "helloworldSpatial")
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Get all Datasheet info
myDatasheets <- datasheet(myScenario)

# Get a specific Datasheet
myDatasheet <- datasheet(myScenario, name = "helloworldSpatial_RunControl")

# Modify Datasheet
myDatasheet$MaximumTimestep <- 10

# Save Datasheet
saveDatasheet(ssimObject = myScenario, 
              data = myDatasheet, 
              name = "helloworldSpatial_RunControl")
          
# Import data after saving
saveDatasheet(ssimObject = myScenario, 
              data = myDatasheet, 
              name = "helloworldSpatial_RunControl",
              import = TRUE)
        
# Save the new Datasheet to a specified output path
saveDatasheet(ssimObject = myScenario, 
              data = myDatasheet, 
              name = "helloworldSpatial_RunControl",
              path = tempdir())
              
# Save a raster stack using fileData
# Create a raster stack - add as many raster files as you want here
map1 <- datasheetSpatRaster(myScenario, 
                            datasheet = "helloworldSpatial_InputDatasheet",
                            column = "InterceptRasterFile")
inRasters <- terra::rast(map1)

# Change the name of the rasters in the input Datasheets to match the stack
inSheet <- datasheet(myScenario, name = "helloworldSpatial_InputDatasheet")
inSheet[1,"InterceptRasterFile"] <- names(inRasters)[1]

# Save the raster stack to the input Datasheet
saveDatasheet(myScenario, data = inSheet, 
              name = "helloworldSpatial_InputDatasheet", 
              fileData = inRasters)

## End(Not run)

Description

Create or open one or more Scenarios from a SsimLibrary.

Usage

scenario(
  ssimObject = NULL,
  scenario = NULL,
  sourceScenario = NULL,
  folder = NULL,
  summary = NULL,
  results = FALSE,
  forceElements = FALSE,
  overwrite = FALSE
)

Arguments

Details

For each element of Scenario:

• If element/Project/SsimObject uniquely identifies an existing Scenario: Returns the existing Scenario.

• If element/Project/SsimObject uniquely identifies more than one existing Scenario: Error.

• If element/Project/SsimObject do not identify an existing Scenario or Project: Error.

• If element/Project/SsimObject do not identify an existing Scenario and element is numeric: Error - a name is required for new Scenarios. SyncroSim will automatically assign an id when a Scenario is created.

• If element/Project/SsimObject do not identify an existing Scenario and do identify a Project, and element is a character string: Creates a new Scenario named element in the Project. SyncroSim automatically assigns an id. If sourceScenario is not NULL the new Scenario will be a copy of sourceScenario.

Value

A Scenario object representing a SyncroSim scenario, a list of Scenario objects, or a data frame of Scenario names and descriptions. If summary = FALSE, returns one or more Scenario objects representing SyncroSim Scenarios. If summary = TRUE, returns Scenario summary info.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession) 
myProject <- project(myLibrary, project = "My Project")

# Create a new Scenario
myScenario <- scenario(myProject, scenario = "My Scenario")


# Create a new Scenario from an existing Scenario
myScenarioCopy <- scenario(myProject, scenario = "My Scenario Copy",
                           sourceScenario = myScenario)
                          
# Find all the Scenarios in a SsimLibrary
scenario(myLibrary)

# Only return the results Scenarios for a SsimLibrary
scenario(myLibrary, results = TRUE)

# Overwrite an existing Scenario
myNewScenario <- scenario(myProject, scenario = "My New Scenario", 
                         overwrite = TRUE)

## End(Not run)

Description

Scenario object representing a SyncroSim Scenario. A Scenario is the lowest level of organization in the SyncroSim workflow, and is often used to isolate information on a single Datasheet.

Slots

session

Session object. The Session associated with the Scenario

filepath

character string. The path to the Scenario's SsimLibrary on disk

datasheetNames

character string. Names and scope of all Datasheets in Scenario's SsimLibrary

projectId

integer. The Project id

scenarioId

integer. The Scenario id

parentId

integer. For a result Scenario, this is the id of the parent Scenario. 0 indicates this is not a result Scenario

folderId

integer. The folder in which the Scenario exists. If the Scenario exists at the root of the project, then this value is NULL.

See Also

See scenario for options when creating or loading a SyncroSim Scenario.

Description

Retrieves the scenarioId of a Scenario.

Usage

scenarioId(scenario)

## S4 method for signature 'character'
scenarioId(scenario)

## S4 method for signature 'Scenario'
scenarioId(scenario)

Arguments

Value

Integer id of the input Scenario.

Examples

## Not run: 
# Set the file path and name of the new SsimLibrary
myLibraryName <- file.path(tempdir(),"testlib")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession) 
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Get Scenario ID of Scenario
scenarioId(myScenario)

## End(Not run)

Description

Methods to create or return a SyncroSim Session.

Usage

session(x = NULL, silent = TRUE, printCmd = FALSE)

## S4 method for signature 'missingOrNULLOrChar'
session(x = NULL, silent = TRUE, printCmd = FALSE)

## S4 method for signature 'SsimObject'
session(x = NULL, silent = TRUE, printCmd = FALSE)

## S4 method for signature 'Folder'
session(x = NULL, silent = TRUE, printCmd = FALSE)

session(ssimObject) <- value

## S4 replacement method for signature 'NULLOrChar'
session(ssimObject) <- value

## S4 replacement method for signature 'SsimObject'
session(ssimObject) <- value

Arguments

Details

In order to avoid problems with SyncroSim version compatibility and SsimLibrary updating, the new Session must have the same filepath as the Session of the SsimObject e.g. filepath(value)==filepath(session(ssimObject)). Therefore, the only time when you will need to set a new SyncroSim Session is if you have updated the SyncroSim software and want to update an existing SsimObject to use the new software.

Value

A SyncroSim Session object.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session, SsimLibrary, and Project
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
myProject <- project(myLibrary, project = "Definitions")

# Lists the folder location of SyncroSim Session
filepath(mySession)

# Lists the version of SyncroSim Session
version(mySession)

# Data frame of the packages installed with this version of SyncroSim
packages(mySession)

# Set a new SyncroSim Session for the SyncroSim Project
session(myProject) <- session(x = filepath(session(myProject)))

## End(Not run)

Description

A SyncroSim Session object contains a link to a SyncroSim installation. SsimLibrary, Project and Scenario objects contain a Session used to query and modify the object.

Slots

filepath

The path to the SyncroSim installation

silent

If FALSE, all SyncroSim output with non-zero exit status is printed. Helpful for debugging. Default is TRUE

printCmd

If TRUE, arguments passed to the SyncroSim console are also printed. Helpful for debugging. Default is FALSE

condaFilepath

The path to the Conda installation. Default is "default"

See Also

See session for options when creating a Session.

Description

Checks or sets whether a SyncroSim Session is silent or not. In a silent session, warnings from the console are ignored.

Usage

silent(session)

## S4 method for signature 'Session'
silent(session)

## S4 method for signature 'missingOrNULLOrChar'
silent(session)

silent(session) <- value

## S4 replacement method for signature 'character'
silent(session) <- value

## S4 replacement method for signature 'Session'
silent(session) <- value

Arguments

Value

A logical: TRUE if the session is silent and FALSE otherwise.

Examples

## Not run: 
# Set up a SyncroSim Session
mySession <- session()

# Check the silent status of a SyncroSim Session
silent(mySession)

# Set the silent status of a SyncroSim Session
silent(mySession) <- FALSE

## End(Not run)

Description

Creates SELECT, GROUP BY and WHERE SQL statements. The resulting list of SQL statements will be converted to an SQLite database query by the datasheet function.

Usage

sqlStatement(
  groupBy = NULL,
  aggregate = NULL,
  aggregateFunction = "SUM",
  where = NULL
)

Arguments

Details

Variables are column names of the Datasheet. See column names using datasheet(,empty=TRUE) Variables not included in groupBy, aggregate or where will be dropped from the table. Note that it is not possible to construct a complete SQL query at this stage, because the datasheet function may add ScenarioId and/or ProjectId to the query.

Value

Returns a list of SELECT, GROUP BY and WHERE SQL statements used by the datasheet function to construct an SQLite database query.

Examples

## Not run: 
# Query total Amount for each combination of ScenarioId, Iteration, Timestep and StateLabelXID,
# including only Timesteps 0,1 and 2, and Iterations 3 and 4.
mySQL <- sqlStatement(
  groupBy = c("ScenarioId", "Iteration", "Timestep"),
  aggregate = c("yCum"),
  aggregateFunction = "SUM",
  where = list(Timestep = c(0, 1, 2), Iteration = c(3, 4))
)
mySQL

## End(Not run)
## Not run: 
# The SQL statement can then be used in the datasheet function

# Set the file path and name of an existing SsimLibrary
myLibraryName <- file.path("MyLibrary.ssim")

# Set the SyncroSim Session, SsimLibrary, Project, and Scenario
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName,
                         session = mySession)
myProject <- project(myLibrary, project = "Definitions")
myScenario <- scenario(myProject, scenario = "My Scenario")

# Run Scenario to generate results
resultScenario <- run(myScenario)

# Use the SQL statement when loading the Datasheet
myAggregatedDataFrame <- datasheet(resultScenario, 
                                   name = "helloworldSpatial_OutputDatasheet",
                                   sqlStatement = mySQL)
                                   
# View aggregated DataFrame
myAggregatedDataFrame

## End(Not run)

Description

This function is part of a set of functions designed to facilitate the development of R-based Syncrosim Packages. ssimEnvironment retrieves specific environment variables.

Usage

ssimEnvironment()

Value

Returns a single-row data.frame of SyncroSim specific environment variables.

Examples

## Not run: 
# Get the whole set of variables
e <- ssimEnvironment()

# Get the path to transfer directory, for instance
transferdir <- e$TransferDirectory

## End(Not run)

Description

Creates or opens a SsimLibrary object. If summary = TRUE, returns SsimLibrary summary info. If summary = NULL, returns SsimLibrary summary info if ssimObject is a SsimLibrary, SsimLibrary object otherwise.

Usage

ssimLibrary(
  name = NULL,
  summary = NULL,
  packages = NULL,
  session = NULL,
  forceUpdate = FALSE,
  overwrite = FALSE,
  useConda = NULL
)

## S4 method for signature 'SsimObject'
ssimLibrary(
  name = NULL,
  summary = NULL,
  packages = NULL,
  session = NULL,
  forceUpdate = FALSE,
  overwrite = FALSE,
  useConda = NULL
)

## S4 method for signature 'missingOrNULLOrChar'
ssimLibrary(
  name = NULL,
  summary = NULL,
  packages = NULL,
  session = NULL,
  forceUpdate = FALSE,
  overwrite = FALSE,
  useConda = NULL
)

Arguments

Details

Example arguments:

• If name is SyncroSim Project or Scenario: Returns the SsimLibrary associated with the Project or Scenario.

• If name is NULL: Create/open a SsimLibrary in the current working directory with the filename SsimLibrary.ssim.

• If name is a string: If string is not a valid path treat as filename in working directory. If no file suffix provided in string then add .ssim. Attempts to open a SsimLibrary of that name. If SsimLibrary does not exist creates a SsimLibrary of type package in the current working directory.

• If given a name and a package: Create/open a SsimLibrary called name.ssim. Returns an error if the SsimLibrary already exists but is a different type of package.

Value

Returns a SsimLibrary object.

Examples

## Not run: 
# Make sure packages are installed
installPackage("stsim")

# Create or open a SsimLibrary using the default Session
myLibrary <- ssimLibrary(name = file.path(tempdir(), "mylib"))

# Create SsimLibrary using a specific Session
mySession <- session()

myLibrary <- ssimLibrary(name = file.path(tempdir(), "mylib"),
                         session = mySession)

# Retrieve SsimLibrary properties
session(myLibrary)

# Create SsimLibrary from template
installPackage("helloworldSpatial")
mySession <- session()
myLibrary <- ssimLibrary(name = file.path(tempdir(), "mylib"), 
                         session = mySession,
                         forceUpdate = TRUE,
                         packages = "helloworldSpatial",
                         overwrite = TRUE)
                         

## End(Not run)

Description

SsimLibrary object representing a SyncroSim Library. A SsimLibrary is the highest level of organization in the SyncroSim workflow and contains at least one Project.

Slots

session

Session object

filepath

character string. The path to the SsimLibrary on disk

datasheetNames

character string. The name and scope of all Datasheets in the SsimLibrary.

See Also

See ssimLibrary for options when creating or loading a SyncroSim SsimLibrary.

Description

Retrieves the temporary file path to a SyncroSim Session, SsimLibrary, Project or Scenario on disk.

Usage

tempfilepath(ssimObject)

## S4 method for signature 'character'
tempfilepath(ssimObject)

## S4 method for signature 'Session'
tempfilepath(ssimObject)

## S4 method for signature 'SsimObject'
tempfilepath(ssimObject)

Arguments

Value

A character string: the temporary file path to a SyncroSim object on disk.

Examples

## Not run: 
# Specify file path and name of new SsimLibrary
myLibraryName <- file.path(tempdir(), "testlib")

# Set up a SyncroSim Session and SsimLibrary
mySession <- session()
myLibrary <- ssimLibrary(name = myLibraryName, session = mySession)
 
# Get the temporary file path
myFilePath <- tempfilepath(myLibrary)

## End(Not run)

Description

Removes a package from SyncroSim installation

Usage

uninstallPackage(packages, versions = NULL, session = NULL)

## S4 method for signature 'ANY,ANY,character'
uninstallPackage(packages, versions = NULL, session = NULL)

## S4 method for signature 'ANY,ANY,missingOrNULL'
uninstallPackage(packages, versions = NULL, session = NULL)

## S4 method for signature 'ANY,ANY,Session'
uninstallPackage(packages, versions = NULL, session = NULL)

Arguments

Value

Invisibly returns TRUE upon success (i.e.successful removal) and FALSE upon failure.

Examples

## Not run: 
# Set SyncroSim session
mySession <- session()

# Install packages to SyncroSim session
installPackages(packages = c("stsim", "stsim"),
                versions = c("4.0.0", "4.0.1"))

# Uninstalls specific version of package from SyncroSim session
uninstallPackage(packages = "stsim", versions = "4.0.0", session = mySession)

# Uninstalls all instances ofa package from SyncroSim session
uninstallPackage(packages = "stsim", session = mySession)

## End(Not run)

Description

This function is designed to facilitate the development of R-based Syncrosim Packages by allowing developers to send messages to the run log.

Usage

updateRunLog(..., sep = "", type = "status")

Arguments

Value

No returned value, used for side effects

Examples

## Not run: 
# Write a message to run log
updateRunLog(msg)

# Construct and write a message to run log
updateRunLog(msg, additionalMsg, sep = " ")

## End(Not run)

Description

Retrieves or sets the Conda configuration of a SsimLibrary. Note that in order to use conda environments, you will first need to ensure that the conda environment has been created for a given package. You can create the conda environment for a package using the createCondaEnv function.

Usage

useConda(ssimObject)

## S4 method for signature 'character'
useConda(ssimObject)

## S4 method for signature 'SsimLibrary'
useConda(ssimObject)

useConda(ssimObject) <- value

## S4 replacement method for signature 'logical'
useConda(ssimObject) <- value

## S4 replacement method for signature 'SsimLibrary'
useConda(ssimObject) <- value

Arguments

Value

Logical: whether Conda environments will be used during runtime for the given SsimLibrary

Examples

## Not run: 
# Set up a SyncroSim Session, SsimLibrary
mySession <- session()

# Retrieve Conda configuration status of the SsimLibrary
useConda(myLibrary)

# Set the Conda configuration of the SyncroSim Library
useConda(myLibrary) <- TRUE

# Only use Conda with the specified SyncroSim packages
useConda(myLibrary) <- "helloworld"

# Only use Conda with multiple specified SyncroSim packages
useConda(myLibrary) <- c("helloworld", "stsim")

## End(Not run)

Description